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What is empirical Bayes?

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Answer

  • Estimate the hyperparameters of the prior from the data itself (usually by marginal maximum likelihood), then use that prior for the posterior.
  • Cheap approximation to a full hierarchical Bayesian model — avoids MCMC on hyperpriors.
  • Uses: shrinkage for large-scale multiple testing (Efron's LFDR), gene expression, hierarchical rate estimation.
  • Weakness: ignores uncertainty in the hyperparameter → slightly narrower posteriors than full Bayes.
Check yourself — multiple choice
  • Random
  • Estimate hyperparameters from data via marginal MLE, then use prior; cheap approximation to hierarchical Bayes; ignores hyperparameter uncertainty
  • Same as MAP
  • Not real

Empirical Bayes: hyperparameters from data via marginal MLE; cheap hierarchical approx.

#bayesian#estimation

Practise Statistics Fundamentals

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